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2.A.36.7.5
Sodium/hydrogen exchanger 10 (Na+/H+ exchanger 10) (NHE-10) (Solute carrier family 9 member 10) (Solute carrier family 9 member C1) (Sperm-specific Na+/H+ exchanger) (sNHE).  It is predicted to have 17 TMSs in a 13 +  4 TMS arrangement.  The last 4 TMSs are homologous to the 4 TMS voltage sensor of the Ca2+ channel, 1.A.1.11.7. sNHE is a target for inhibition, for use in male contraception, causing inhibition of sperm motility (Mariani et al. 2023). Ion currents through the voltage sensor domains (VSDs) of distinct families of proteins have been studied (Arcos-Hernández and Nishigaki 2023).  The VSD confers voltage sensitivity to different types of transmembrane proteins such as (1) voltage-gated ion channels, (2) the voltage-sensing phosphatase (Ci-VSP), and (3) this sperm-specific Na+/H+ exchanger (sNHE). VSDs contain four TMSs (S1-S4) and several positively charged amino acids in S4, which are essential for the voltage sensitivity of the protein. Generally, in response to changes in the Vm, the positive residues of S4 displace along the plasma membrane without generating ionic currents through this domain. However, some native (e.g., Hv1 channels) and mutants of VSDs produce ionic currents. These gating pore currents are usually observed in VSDs that lack one or more of the conserved positively charged amino acids in S4. The gating pore currents can also be induced by the isolation of a VSD from the rest of the protein domains. Arcos-Hernández and Nishigaki 2023 summarized gating pore currents from all families of proteins with VSDs with classification into three cases: (1) pathological, (2) physiological, and (3) artificial currents.  SLC9C1, underlies hyperpolarization and cyclic nucleotide stimulated proton fluxes across sperm membranes and regulates their hyperactivated motility. It is the first known instance of an ion transporter that uses a canonical voltage-sensing domain (VSD) and an evolutionarily conserved cyclic nucleotide binding domain (CNBD) to influence the dynamics of its ion-exchange domain (ED) (Chowdhury and Pal 2023).  Binding of cAMP causes large conformational changes in the cytoplasmic domains and disrupts key ARD-linked interfaces. These structural changes rescue the transmembrane domains from an auto-inhibited state and facilitate their functional dynamics (Chowdhury and Pal 2023).

Accession Number:Q4G0N8
Protein Name:Sodium/hydrogen exchanger 10
Length:1177
Molecular Weight:135206.00
Species:Homo sapiens (Human) [9606]
Number of TMSs:17
Location1 / Topology2 / Orientation3: Cell projection1 / Multi-pass membrane protein2
Substrate sodium(1+), hydron

Cross database links:

Entrez Gene ID: 285335   
Pfam: PF00027    PF00999   
KEGG: hsa:285335   

Gene Ontology

GO:0005929 C:cilium
GO:0020017 C:flagellar membrane
GO:0016021 C:integral to membrane
GO:0015299 F:solute:hydrogen antiporter activity
GO:0030154 P:cell differentiation
GO:0007275 P:multicellular organismal development
GO:0006814 P:sodium ion transport
GO:0030317 P:sperm motility
GO:0007283 P:spermatogenesis

References (3)

[1] “Complete sequencing and characterization of 21,243 full-length human cDNAs.”  Ota T.et.al.   14702039
[2] “The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).”  The MGC Project Teamet.al.   15489334
[3] “Gene discovery in the hamster: a comparative genomics approach for gene annotation by sequencing of hamster testis cDNAs.”  Oduru S.et.al.   12783626

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Predict TMSs (Predict number of transmembrane segments)
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FASTA formatted sequence
1:	MAGIFKEFFF STEDLPEVIL TLSLISSIGA FLNRHLEDFP IPVPVILFLL GCSFEVLSFT 
61:	SSQVQRYANA IQWMSPDLFF RIFTPVVFFT TAFDMDTYML QKLFWQILLI SIPGFLVNYI 
121:	LVLWHLASVN QLLLKPTQWL LFSAILVSSD PMLTAAAIRD LGLSRSLISL INGESLMTSV 
181:	ISLITFTSIM DFDQRLQSKR NHTLAEEIVG GICSYIIASF LFGILSSKLI QFWMSTVFGD 
241:	DVNHISLIFS ILYLIFYICE LVGMSGIFTL AIVGLLLNST SFKAAIEETL LLEFWTFLSR 
301:	IAFLMVFTFF GLLIPAHTYL YIEFVDIYYS LNIYLTLIVL RFLTLLLISP VLSRVGHEFS 
361:	WRWIFIMVCS EMKGMPNINM ALLLAYSDLY FGSDKEKSQI LFHGVLVCLI TLVVNRFILP 
421:	VAVTILGLRD ATSTKYKSVC CTFQHFQELT KSAASALKFD KDLANADWNM IEKAITLENP 
481:	YMLNEEETTE HQKVKCPHCN KEIDEIFNTE AMELANRRLL SAQIASYQRQ YRNEILSQSA 
541:	VQVLVGAAES FGEKKGKCMS LDTIKNYSES QKTVTFARKL LLNWVYNTRK EKEGPSKYFF 
601:	FRICHTIVFT EEFEHVGYLV ILMNIFPFII SWISQLNVIY HSELKHTNYC FLTLYILEAL 
661:	LKIAAMRKDF FSHAWNIFEL AITLIGILHV ILIEIDTIKY IFNETEVIVF IKVVQFFRIL 
721:	RIFKLIAPKL LQIIDKRMSH QKTFWYGILK GYVQGEADIM TIIDQITSSK QIKQMLLKQV 
781:	IRNMEHAIKE LGYLEYDHPE IAVTVKTKEE INVMLNMATE ILKAFGLKGI ISKTEGAGIN 
841:	KLIMAKKKEV LDSQSIIRPL TVEEVLYHIP WLDKNKDYIN FIQEKAKVVT FDCGNDIFEE 
901:	GDEPKGIYII ISGMVKLEKS KPGLGIDQMV ESKEKDFPII DTDYMLSGEI IGEINCLTNE 
961:	PMKYSATCKT VVETCFIPKT HLYDAFEQCS PLIKQKMWLK LGLAITARKI REHLSYEDWN 
1021:	YNMQLKLSNI YVVDIPMSTK TDIYDENLIY VILIHGAVED CLLRKTYRAP FLIPITCHQI 
1081:	QSIEDFTKVV IIQTPINMKT FRRNIRKFVP KHKSYLTPGL IGSVGTLEEG IQEERNVKED 
1141:	GAHSAATARS PQPCSLLGTK FNCKESPRIN LRKVRKE