TCDB is operated by the Saier Lab Bioinformatics Group
« See all members of the family


3.E.1.1.14
Synechocystis halorhodopsin of 234 aas and 7 TMSs.  The 3-D structure is known (Astashkin et al. 2022). MRs can pump various monovalent ions like Na+, K+, Cl-, I-, and NO3-. The only characterized MR proposed to pump sulfate in addition to halides belongs to the cyanobacterium Synechocystis sp. PCC 7509 and is named Synechocystis halorhodopsin (SyHR).  Astashkin et al. 2022 presented the crystal structure of SyHR in the ground state, the structure of its sulfate-bound form as well as two photoreaction intermediates, the K and O states. The data reveal the molecular origin of the unique properties of the protein (exceptionally strong chloride binding and proposed pumping of divalent anions) and sheds light on the mechanism of anion release and uptake in cyanobacterial halorhodopsins. The unique properties of SyHR highlight its potential as an optogenetics tool and may help engineer different types of anion pumps with applications in optogenetics (Astashkin et al. 2022).

Accession Number:7ZOY_A
Protein Name:A Chain A, Synechocystis halorhodopsin
Length:235
Molecular Weight:
Species:Synechocystis sp. PCC 7509 [927677]
Number of TMSs:7
Substrate fluoride, chloride, halide salt, bromide, iodide, sulfate

Cross database links:

External Searches:

Analyze:

Predict TMSs (Predict number of transmembrane segments)
Window Size: Angle:  
FASTA formatted sequence
1:	XAQIWLWIGV IGMALGSIFF GIGAHNAKNE RWKILFTINF FICAIATGLY LSMALGQGRS 
61:	VIAGRPTVWV RYITWFLSTP LLILDLTFLG KTSLPITASL LGANAYMIAT GFVATISADR 
121:	TIGHIWYVVS CFAFLATVYL LVNQYRKQAE RNYPQAKKVF RKLLSVHLVL WTLYPIVWLL 
181:	GNTGFNAVNQ GTETMFYTIL DITSXVGFGF LSLNSMHTLE KNTESVSSYE SSTI