3.E.1.7.5 Channel rhodopsin of 829 aas and 7 N-terminal TMSs, KnChR. Channelrhodopsins (ChRs) are light-gated cation (H+, Na+, K+, and Ca2+) channels extensively applied as optogenetics tools for manipulating neuronal activity. All ChRs have a large cytoplasmic domain. The cation channel properties of KnChR from a filamentous terrestrial alga, Klebsormidium nitens, have been described (Tashiro et al. 2021). The C-terminal cytoplasmic domain has a peptidoglycan binding domain (FimV), and modulates the ion channel properties. The channel closure rate is affected by the C-terminus moiety, and truncation of the moiety to various lengths prolongs the channel open lifetime by more than 10-fold. Two Arginine residues (R287 and R291) are crucial for altering the photocurrent kinetics. Tashiro et al. 2021 proposed that electrostatic interaction between the rhodopsin domain and the C-terminal domain accelerates the channel kinetics. Maximal sensitivity was observed at 430 and 460 nm, the former making KnChR one of the most blue-shifted ChRs, serving as a novel prototype for studying the molecular mechanism of color tuning of the ChRs.
|
Accession Number: | GAQ79757.1 |
Protein Name: | GAQ79757.1 hypothetical protein KFL_000370310 [Klebsormidium nitens] |
Length: | 830 |
Molecular Weight: | |
Species: | Klebsormidium nitens [105231] |
Number of TMSs: | 7 |
Substrate |
|
---|
1: MTVDAHSTVD AHSTVTDSHS AGNGTESCYV ADFLGMHHES HEGALYSVYK SLEWGCFLIS
61: IGLFVFYLQQ YRKKTAGWEV IYIAFIESFK YIFEIFWPHN NPAQLNIYGV NKSVPWVRYM
121: EWMITCPVIL MALSNISGEE GEYTHRSMQL LATDQGAILC AITAAASEGA ISAVFYAIGV
181: CYGICTFYFC LQIYIEAYFT LPETCHSAVK WMAVIFYAGW LCYPCFFLAG SEGWGNLSYE
241: GSAIGHCIAD LLSKNAWGVM HWWIRCQLEE YKHTHNGQLP HYSLETRAKM RAEAGHIIAG
301: SLGSVLHVAG HQHHHFHFDE DSGMQGAQIQ GQPLAQANER ANLKASLLNG NAVNYNQAVQ
361: AQPQAFQIQS GEDGYVISMN QGESSASGSR RTTQNIEGPK KDPVASAFSK ALGSMKSKVT
421: EHFTKDLPPS ARPDSPSRRG SARGGADAPT AQPQQSMKID LRDLANNPQL QQQLSMMLKG
481: QMAGGYALKT DLKDLANNPQ LQQQLSMMLK GQMGAGNSNT NQGSNNGSPR ARPVSEELAQ
541: PARLQKAQSA RATSNLDDEI EEQAPAQMSR RPSARVPRAT AAADEEQAPA RTLSRKISRG
601: DGGEPVSEER LQKRPSYRAA KAAAEAADED MTDAPAPALA RRPSARAPAA DADEETAPVR
661: TASLRRAGSK SPGNSLPSSP SRRVSRANSL RAPVSASVLL CDADGDMGDF FLDQFAAVPN
721: SKCSVKVVAT PDELIDALAT GRAYDFVMVP KGVITSDPEI SEEIRAHAQT PLVAFGPALE
781: GMAVAEVKAH MFELDVDDYI GLPKRGQEYP VEDLEALVWK YKKVADDSN