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1.B.22.1.3 The dodecameric secretin, GspD of 650 aas. The 3-d structure is known (PDB 5WQ8) (Korotkov et al. 2013). It reveals a double β-barrel channel with about 60 β-strands in each barrel (Yan et al. 2017).
Accession Number:	P76115
Protein Name:	Probable TonB-dependent receptor YncD
Length:	700
Molecular Weight:	77261.00
Species:	Escherichia coli (strain K12) [83333]
Location¹ / Topology² / Orientation³:	Cell outer membrane¹ / Peripheral membrane protein²
Substrate	protein polypeptide chain

Structure:
6V81

UniProt (Universal Protein Resource)
CDD Search (Conserved Domain Database)

Predict TMSs (Predict number of transmembrane segments)

FASTA formatted sequence

1:	MKIFSVRQTV LPALLVLSPV VFAADEQTMI VSAAPQVVSE LDTPAAVSVV DGEEMRLATP 
61:	RINLSESLTG VPGLQVQNRQ NYAQDLQLSI RGFGSRSTYG IRGIRLYVDG IPATMPDGQG 
121:	QTSNIDLSSV QNVEVLRGPF SALYGNASGG VMNVTTQTGQ QPPTIEASSY YGSFGSWRYG 
181:	LKATGATGDG TQPGDVDYTV STTRFTTHGY RDHSGAQKNL ANAKLGVRID EASKLSLIFN 
241:	SVDIKADDPG GLTKAEWKAN PQQAPRAEQY DTRKTIKQTQ AGLRYERSLS SRDDMSVMMY 
301:	AGERETTQYQ SIPMAPQLNP SHAGGVITLQ RHYQGIDSRW THRGELGVPV TFTTGLNYEN 
361:	MSENRKGYNN FRLNSGMPEY GQKGELRRDE RNLMWNIDPY LQTQWQLSEK LSLDAGVRYS 
421:	SVWFDSNDHY VTPGNGDDSG DASYHKWLPA GSLKYAMTDA WNIYLAAGRG FETPTINELS 
481:	YRADGQSGMN LGLKPSTNDT IEIGSKTRIG DGLLSLALFQ TDTDDEIVVD SSSGGRTTYK 
541:	NAGKTRRQGA ELAWDQRFAG DFRVNASWTW LDATYRSNVC NEQDCNGNRM PGIARNMGFA 
601:	SIGYVPEDGW YAGTEARYMG DIMADDENTA KAPSYTLVGL FTGYKYNYHN LTVDLFGRVD 
661:	NLFDKEYVGS VIVNESNGRY YEPSPGRNYG VGMNIAWRFE

1.B.22.1.3
The dodecameric secretin, GspD of 650 aas. The 3-d structure is known (PDB 5WQ8) (Korotkov et al. 2013). It reveals a double β-barrel channel with about 60 β-strands in each barrel (Yan et al. 2017).

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1.B.22.1.3The dodecameric secretin, GspD of 650 aas. The 3-d structure is known (PDB 5WQ8) (Korotkov et al. 2013). It reveals a double β-barrel channel with about 60 β-strands in each barrel (Yan et al. 2017).

Cross database links:

External Searches:

Analyze:

1.B.22.1.3
The dodecameric secretin, GspD of 650 aas. The 3-d structure is known (PDB 5WQ8) (Korotkov et al. 2013). It reveals a double β-barrel channel with about 60 β-strands in each barrel (Yan et al. 2017).