TCID | Name | Domain | Kingdom/Phylum | Protein(s) |
---|---|---|---|---|
8.A.183.1.1 | The RelA-associated inhibitor, PPP1R13L, AMFR, RNF45. It is an inhibitor of the ASPP protein, iASPP, also called the NFkB-interacting protein 1 (Bergamaschi et al. 2003). See also the family description and Zheng et al. 2022. It is an E3 ubiquitin-protein ligase, AMFR, of 643 aas and 6 - 8 TMSs in the first (N-terminal) half of the protein. The second (C-terminal) half is hydrophilic. This E3 ubiquitin-protein ligase mediates the polyubiquitination of lysine and cysteine residues in target proteins, such as CD3D, CYP3A4, CFTR, INSIG1, SOAT2/ACAT2 and APOB for proteasomal degradation (Shimizu et al. 1999, Liu et al. 2014, Wang et al. 2017). Homologs of AMFR can be found in the ER-RT family (TC# 3.A.16), the PPI family (TC# 3.A.20) and the Rcf family (8.A.112). | Eukaryota |
Metazoa, Chordata | PPP1R13L of Homo sapiens |
8.A.183.1.2 | E3 ubiquitin protein ligase, RIN2 isoform X3, of 505 aas and 6 TMSs. | Eukaryota |
Viridiplantae, Streptophyta | RIN2 of Arachis hypogaea (peanut) |
8.A.183.1.3 | E3 ubiquitin-protein ligase, synoviolin, Syvn1, of 621 aas and 6 TMSs. | Eukaryota |
Metazoa, Chordata | Synoviolin of Anguilla anguilla (European eel) |
8.A.183.1.4 | E3 ubiquitin-protein ligase, Hrd1, of 853 aas and 6 TMSs. The N-terminal transmembrane domain resembles that of Q6NPT7 (TC# 3.A.16.1.5) while the C-terminal domain is rich in serine and proline, resembling S7UI33 (TC# 1.A.17.2.5) | Eukaryota |
Fungi, Basidiomycota | Hrd1 of Ceratobasidium sp. 395 |
8.A.183.1.5 | E3 ubiquitin ligase RIN2-like protein of 402 aas and 6 - 8 TMSs. | Eukaryota |
Viridiplantae, Chlorophyta | RIN2 of Micractinium conductrix |
8.A.183.1.6 | ERAD-associated E3 ubiquitin-protein ligase, HRD1, of 458 aas and 6 TMSs. | Eukaryota |
Apicomplexa | HRD1 of Plasmodium falciparum |
8.A.183.2.1 | Lipid droplet-regulated VLDL assembly factor, AUP1 of 410 aas and possibly as many as 4 TMSs at residue positions 20 - 60 ( 2 TMSs) + 1 at residue 200 + 1 at about residue 340. It plays a role in the translocation of terminally misfolded proteins from the endoplasmic reticulum (ER) lumen to the cytoplasm and their degradation by a proteasome. It also plays a role in lipid droplet formation and induces lipid droplet clustering (Klemm et al. 2011). It also regulates the ER-associated degradation and polyubiquitination of NKCC2 (Frachon et al. 2024). | Eukaryota |
Metazoa, Chordata | AUP1 of Homo sapiens |